1 - 20 of 307 Works in Missing-nin (Naruto)

Navigation

Listing Works

  1. Tags
    Summary

    Sakura Haruno left the village two and a half years ago, disappearing without a word. Branded a traitor and navigating a world far harsher than she expected, she learns what it truly means to survive alone—and what it costs to protect the people she loves.

    Meanwhile, back home, Naruto and Sasuke carry on with their lives, unaware of the choices that shaped her absence. Secrets, loyalty, and the bonds of friendship will be tested in ways none of them could have imagined.

    (please read 'things to do' first!!)

    Series
    Language:
    English
    Words:
    11,242
    Chapters:
    3/?
    Comments:
    7
    Kudos:
    40
    Bookmarks:
    13
    Hits:
    452
  2. Tags
    Summary

    Soulmates exist. Nobody knows what they mean, except that you receive the name of your soulmate somewhere on your body, and in some cases, a bond of empathy so extreme you feel each other's pain to the point of mirroring life-threatening wounds.

    Hatake Kakashi refuses to cover his still-not disappearing mark, out of sentimentality. When Itachi comes to him with some alarming information, he's suddenly sent on a long-term undercover mission out of the village to uncover the conspiracy behind the masked man who tried to take advantage of the chaos.

    He doesn't plan on discovering his long-dead soulmate.

    Language:
    English
    Words:
    4,577
    Chapters:
    1/5
    Kudos:
    3
    Bookmarks:
    1
    Hits:
    32
  3. Tags
    Summary

    Naruto Uzumaki was never going to stay hidden.
    When the Akatsuki dared to take Kashi, they had no idea who they’d crossed. Naruto might be a kid, but he’s also the son of the genius ninja Kakashi Hatake. That means he’ll find a way to bring Kashi home, no matter what. Sage Mode. Shinobi terrorists. Pain himself. Bring it on. Naruto will face down the Sage himself if it means saving the man who raised him.
    Because for Naruto, “family” isn’t who you’re born to. It’s who you bleed for.

    (A missing-nin Kakashi raises Naruto AU with sage-mode shenanigans, feral but supportive Kurama, the unyielding loyalty that is Maito Gai, and the unrelenting chaos that is Naruto’s “you hurt my dad” mode. Sequel to The Fox Runs to Sand.)

    Series
    Language:
    English
    Words:
    22,386
    Chapters:
    5/10
    Comments:
    118
    Kudos:
    321
    Bookmarks:
    74
    Hits:
    4,611
  4. Tags
    Summary

    Naruto Uzumaki finally had enough. After how Konoha treated him, why should he fight for its sake? He'd rather leave, and with the help of what's in his gut he does just that.

    Hunter-nin, capture squads, assassination attempts, it's all part of life as a missing-nin. Not that Naruto minds. He'll put up with all of it, if that's what it takes to live free.

    Really though, after the first few times, you'd think the villages would stop sending kunoichi after the guy with supernatural foxy charms. Luckily for Naruto, no one ever accused the higher-ups of being all that bright.

    Language:
    English
    Words:
    48,987
    Chapters:
    14/?
    Comments:
    106
    Kudos:
    500
    Bookmarks:
    208
    Hits:
    34,608
  5. Tags
    Summary

    Deidara did not like talking about his upbringing. He didn't want the sympathy or the pitying looks. He especially did not want it getting credit for his obsession with destruction, violent outbursts or need for approval. For his art. That was all him, thank you very much.

    or

    Deidara grows up, becomes a missing nin, joins the Akatsuki and somehow manages to find purpose along the way.

    Language:
    English
    Words:
    83,563
    Chapters:
    22/?
    Comments:
    136
    Kudos:
    218
    Bookmarks:
    33
    Hits:
    3,428
  6. Tags
    Summary

    ''Years after the fall of the great Uzushio, a half-blood child will be born — bearing the weight of the world and the legacy of Kaguya Otsutsuki." the Great Toad Sage said, "When the moon turns red, and when the great nations are in despair, the child shall appear and seal back the Mother of Chakra--somehwere, beneath the Kanji of Seals."
    It wasn't supposed to be him, right? He's just a random orphan who holds the Nine-Tails in place-- the deadlast, the pariah. He doesn't even believe he's an Uzumaki himself yet!
    "Naruto Uzumaki." Jiraiya called, looking down at him, with some seriousness he've never seen from the clumsy pervy sage, "The son of Minato Namikaze and Kushina Uzumaki. You are the half-blood."

    Language:
    English
    Words:
    76,049
    Chapters:
    27/?
    Comments:
    86
    Kudos:
    124
    Bookmarks:
    29
    Hits:
    4,831
  7. Tags
    Summary

    How much can a weapon take before it shatters? How much pressure can a person take until they snap? How far can someone’s loyalty be stretched before they give in to doubt?

    Kakashi, for one, knows that limit. He knows it, and he’s about to make it the whole world’s problem.

    Or, after a series of revelations, Kakashi defects from the village with Itachi after the Uchiha massacre and joins the Akatsuki. His choice changes everything.

    Bi-weekly updates on Friday!

    Naruto era: Chapters 1-15
    Time skip era: Chapters 16-17
    Shippuden era: Chapters 18-?

    Series
    Language:
    English
    Words:
    185,656
    Chapters:
    36/?
    Comments:
    563
    Kudos:
    1,070
    Bookmarks:
    181
    Hits:
    33,635
  8. Tags
    Summary

    Kakashi Hatake, the Sixth Hokage of Konohagakure, passes away just before he can officially pass down his mantle to the next leader. But fate isn't done with him yet—Kakashi is given a second chance. He finds himself transported back to the past, armed with the knowledge of future events and the devastating consequences of his past decisions. This time, Kakashi is determined to make things right.

    No longer bound by the same morals that once defined him, Kakashi is willing to take any measure necessary to change the course of history. He’s no longer the hesitant, duty-bound Hokage of the past. With an unwavering resolve, he pursues every possible path, making choices that challenge everything he once believed in. His goal is simple: to save his friends, protect his village, and create a future free from the pain of the past.

    But in abandoning his moral compass, Kakashi finds that his actions have consequences. As he faces new enemies and revisits old relationships, he must grapple with the cost of his choices and the ever-shifting balance between salvation and sacrifice.

    Language:
    English
    Words:
    71,294
    Chapters:
    28/?
    Comments:
    157
    Kudos:
    547
    Bookmarks:
    108
    Hits:
    15,823
  9. Tags
    Summary

    After initially getting told he wasn't allowed to take in his sensei’s son and being reassured baby Naruto would be taken care of, Kakashi throws himself into ANBU, only to return from a mission 2 years later and discover Naruto getting beaten up by a crowd of drunk civilians, and a few shinobi to boot. Desperate to save his little brother, Kakashi takes Naruto, packs up the barest of basics and whatever else he can quickly shove into a bag, and books it out of the village, fully prepared to become a missing nin to protect Naruto. Only, a teleportation jutsu goes wrong, and Kakashi and young Naruto are thrown across galaxies onto Kordia IV, where the young copy nin witnesses an armored warrior disposing of what appeared to be two allies of theirs before moving onto a third. Kakashi, young enough to still react to his anger, especially after what he just went through, snaps. After all, like Obito said; those who break the rules are trash, but those who abandon their teammates are worse than trash.

    Language:
    English
    Words:
    2,629
    Chapters:
    1/?
    Comments:
    16
    Kudos:
    50
    Bookmarks:
    24
    Hits:
    267
  10. Tags
    Summary

    When Kakashi was ten, he was killed in action on a dangerous mission.

    At least, that’s what the report says. His mission was closed, archived, and his name forgotten to the sands of time. But Kakashi hadn’t died, and his name was steadily changing from forgotten to notorious.

    Then again, one would expect nothing less than notorious from the leader of the Akatsuki.

    Language:
    English
    Words:
    130,524
    Chapters:
    32/?
    Collections:
    2
    Comments:
    421
    Kudos:
    1,319
    Bookmarks:
    312
    Hits:
    46,025
  11. Tags
    Summary

    Seventy-two hours became a lifetime, where each cycle of the nightmare came with a flawless transition, beginning to end, beginning to end. He’d mistakenly thought that his own mangekyou would spare him the hellscape brought to life around him; in the moments between cruel words and sharpened blades, he told himself that he should have run away, whether he would have been branded a coward or not. There was no one left to see him as the second son of the clan head, not when the clan was no more. And then the torture continued and his screams continued, where he shook like a leaf while his own mind scolded him for being weak, words fed to him from the mouths of his dead family and from the brother he loved more than anything. He was weak, always too weak, a prodigy but not enough of one, a smaller, generic version of his older brother. Nothing he said or did was ever good enough for their father, and he finally understood that the man had known the truth all along. He would never be good enough. He had been pathetic since birth.

    Language:
    English
    Words:
    55,358
    Chapters:
    19/?
    Collections:
    1
    Comments:
    48
    Kudos:
    139
    Bookmarks:
    24
    Hits:
    4,969
  12. Tags
    Summary

    In a world where people weren't interested in him, he turned to the foxes. There was, however, someone who made the human existence still have a meaning.

    Or, what if the Kyuubi had actually made Naruto more kitsune-like, and the Uchiha massacre never happened?

     

    We'd still be polar opposites, pulling each other in like a magnet.

    Language:
    English
    Words:
    17,800
    Chapters:
    6/?
    Comments:
    11
    Kudos:
    162
    Bookmarks:
    35
    Hits:
    3,152
  13. Tags
    Summary

    A story where a girl turn others' underestimation of her into a weapon.

    Where a (not quite) Sheep fled the farmstead.
    This is the afterwards.

    (The plantation was rotting away, anyways.)

    Series
    Language:
    English
    Words:
    103,925
    Chapters:
    29/60
    Comments:
    198
    Kudos:
    1,027
    Bookmarks:
    276
    Hits:
    32,265
  14. Tags
    Summary

    The ocean is similar to war in a peculiar way.

    The ocean promises nourishment and adventure, while war teases justice and honor. Both can rage and ravage, yet sometimes battlefields quiet and waters calm. The ocean pulls laughing children deep into the abyss, but these same children yearn for glory in killing nameless faces.

    Despite these similarities, they could never be the same—for one simple reason: the ocean is said to be the birthplace of man, but war only creates monsters.

    Language:
    English
    Words:
    5,839
    Chapters:
    6/?
    Comments:
    17
    Kudos:
    13
    Bookmarks:
    2
    Hits:
    154
  15. Tags
    Summary

    The Ōtsutsuki are defeated, the battle is won, the world is saved - but the cost was high.

    At the age of sixteen, Boruto Uzumaki and Sarada Uchiha emerge as Konoha's victors of the fight that sealed the fate of the earth, but the victory doesn't look like one. The blood on their hands and the lives taken by their weapons let things appear in a very different light, and the two teenagers are forced to leave everything behind in order to protect the village they fought for and the loved ones still alive.

    This collection of one-shots accompanies the two friends through the years, through loss and suffering, but also through moments in which two broken individuals can help each other become whole again.

    Language:
    English
    Words:
    48,435
    Chapters:
    23/?
    Comments:
    322
    Kudos:
    606
    Bookmarks:
    45
    Hits:
    15,598
  16. Tags
    Summary

    “Wanna smoke?”

    Shikamaru raises his packet of cigarettes. Sakura leans over the balcony, hair twisting down her face. Laughs. That fake smile such a quick, beautiful lie. Perhaps not such a lie after all. The clouds above going gold. It's become a routine, by now - her above, him below, calling up. A comfortable kind of repetition.

    “Some other time, Nara,” She says.

    Her shunshin sounds like the beginnings of a summer storm in the trees - it’s so fast, it barely leaves a trace.

    (In which Sasuke goes missing, Naruto runs after him, and Sakura is left to stitch it all together as she always is. Funnily, she's got pretty good at it over all these years.)

    Language:
    English
    Words:
    11,391
    Chapters:
    4/?
    Comments:
    16
    Kudos:
    122
    Bookmarks:
    31
    Hits:
    2,090
  17. Tags
    Summary

    In which Naruto, Sasuke and Sakura become friends much earlier in life than in canon, but Naruto leaves the village to join the Akatsuki, in pursuit of a place where he won’t be shunned. Leaving Sasuke and Sakura to join the Anbu.

    Language:
    English
    Words:
    7,718
    Chapters:
    3/?
    Comments:
    1
    Kudos:
    32
    Bookmarks:
    11
    Hits:
    822
  18. Tags
    Summary

    Kakashi Hatake is a terrible traitor.
    He fled the Hidden Leaf over a decade ago. But despite his missing-nin status, Kakashi keeps getting pulled into their messes. Between a shinobi terrorist group, a sassy fifteen-year-old, and a snarky chakra fox, Kakashi doesn't have time to deal with the Hidden Leaf's problem. But when the Akatsuki make the mistake of messing with his kid, Kakashi is more than willing to side with the Leaf. Come hell or high water, he'll do whatever it takes to keep Naruto safe.
    And hell hath no fury like a Hatake scorned.

    (A missing-nin Kakashi adopts Naruto AU featuring best friend Gaara, pervy uncle Jiraiya, sass master Kurama, and a very, very confused Konoha 12 11. Sequel to The Fox Runs From Fire.)

    Series
    Language:
    English
    Words:
    51,883
    Chapters:
    11/11
    Comments:
    283
    Kudos:
    1,260
    Bookmarks:
    233
    Hits:
    21,094
  19. Tags
    Summary

    Over fifty percent of the shinobi population was wiped out in the short span of the Fourth Great Shinobi War. Over fifty percent across all the elemental nations. The worst part, it took people she wasn’t okay losing.
    And everyone else around her acted like after three years that rebuilding the village made everything perfect again. They made her sick, they made her angry, they made her not want to be near them.
    Sakura looked around and let that random passing thought have just enough space to maybe take root in her mind. Not be near them. She could leave. The urge didn’t just strike her and she left. No, Haruno Sakura let it fester. It struck her as a fun notion on the roof of the hospital on her lunch break. It was forgotten just as quickly. But it didn’t stay forgotten for long.

    Short story about if after the war there was nothing tying her to Konoha anymore and she left instead of staying. She becomes a whole new person in her new life and meets some people along the way.

    Language:
    English
    Words:
    8,111
    Chapters:
    1/1
    Comments:
    4
    Kudos:
    81
    Bookmarks:
    12
    Hits:
    506
  20. Tags
    Summary

    When Sasuke returns with a warning, everything Naruto thought he believed about loyalty, the village, and himself begins to unravel.

    Faced with the choice between obedience and the only bond that ever truly felt real, Naruto leaves the village behind—not for vengeance, not for power, but for something far more dangerous: truth.

    Together, Naruto and Sasuke carve out a quiet life beyond the reach of Konoha, building something fragile and unspoken in the wilderness. But peace doesn’t last when the world is built to break anything it can’t control.
    As the village turns from hesitant to hostile, Naruto and Sasuke must fight not just to survive—but to prove that what they found in each other was never a mistake.

    A story about love without permission, peace without legacy, and what’s left behind when the world chooses to forget you.

    Series
    Language:
    English
    Words:
    18,104
    Chapters:
    7/7
    Comments:
    17
    Kudos:
    88
    Bookmarks:
    16
    Hits:
    1,334

Filters

Filter results:
Submit

Include

?
Include Ratings
Include Warnings
Include Categories
Include Fandoms
Include Characters
Include Relationships
Include Additional Tags

Exclude

?
Exclude Ratings
Exclude Warnings
Exclude Categories
Exclude Fandoms
Exclude Characters
Exclude Relationships
Exclude Additional Tags

More Options

Crossovers
Completion Status
Word Count
Date Updated
Submit

Clear Filters

Navigation